Ashley Tsang

Hello! I am a second-year Bioinformatics PhD student in the Department of Computational Medicine and Bioinformatics at the University of Michigan. Previously, I studied at Johns Hopkins University, where I obtained a B.S. in Biomedical Engineering and Computer Science, and M.S.E in Biomedical Engineering.

My research focus lies in developing multi-modal and spatial informatics methods for understanding the tumor microenvironment and drivers of response to therapies.

Please reach out if you’d like to chat further!

Selected Publications

Assessing the tumor immune landscape across multiple spatial scales to differentiate immunotherapy response in metastatic non-small cell lung cancer
Ashley P Tsang(*), Santhoshi N Krishnan(*), Joel N Eliason(*), Jake J McGue, Angel Qin, Timothy L Frankel, Arvind Rao
Laboratory Investigation, 2024
[Journal]
(*) indicates joint first authors

Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R, and GenePattern Notebook implementations of CoGAPS
Jeanette A I Johnson(*), Ashley P Tsang(*), Jacob T Mitchell, Emily F Davis-Marcisak, Thomas Sherman, Ted Liefeld, Melanie Loth, Loyal Goff, Jacquelyn Zimmerman, Ben Kinny-Köster, Elizabeth Jaffee, Pablo Tamayo, Jill Mesirov, Michael Reich, Elana J Fertig, Genevieve L Stein-O’Brien
Nature Protocols, 2023
[Journal][Code]
(*) indicates joint first authors

Biopsy Needle Accessory
Robert Liddell, Deborah Weidman, Ashley Tsang, Gohta Aihara, Tatiana Pereira, Bibhav Poudel, Jacob Desman, Katherine Kovrizhkin, Sean Darcy, Jinghua Zhang, Shababa Matin
PCT US2022/077146, filed Sept. 29, 2022.