Publications

You can also find my articles on my Google Scholar profile.

Patent

Biopsy Needle Accessory
Robert Liddell, Deborah Weidman, Ashley Tsang, Gohta Aihara, Tatiana Pereira, Bibhav Poudel, Jacob Desman, Katherine Kovrizhkin, Sean Darcy, Jinghua Zhang, Shababa Matin
PCT US2022/077146, filed Sept. 29, 2022. Patent Pending.

Journal

Inferring cellular and molecular processes in single-cell data with non-negative matrix factorization using Python, R, and GenePattern Notebook implementations of CoGAPS
Jeanette A I Johnson(*), Ashley P Tsang(*), Jacob T Mitchell, Emily F Davis-Marcisak, Thomas Sherman, Ted Liefeld, Melanie Loth, Loyal Goff, Jacquelyn Zimmerman, Ben Kinny-Köster, Elizabeth Jaffee, Pablo Tamayo, Jill Mesirov, Michael Reich, Elana J Fertig, Genevieve L Stein-O’Brien
Nature Protocols, 2023
[Journal] [PDF] [Code]
(*) indicates joint first authors

Deep Learning Model for Static Ocular Torsion Detection Using Synthetically Generated Fundus Images
Chen Wang, Yunong Bai, Ashley Tsang, Yuhan Bian, Yifan Gou, Yan X. Lin, Matthew Zhao, Tony Y. Wei, Jacob M. Desman, Casey Overby Taylor, Joseph L. Greenstein, Jorge Otero-Millan, Tin Yan Alvin Liu, Amir Kheradmand, David S. Zee, Kemar E. Green
Translational Vision Science and Technology, 2023
[Journal][PDF]

Adequacy of samples obtained via percutaneous core-needle rebiopsy for EGFR T790M molecular analysis in patients with non-small cell lung cancer following acquired resistance to first-line therapy: A systematic review and meta-analysis
Bibhav Poudel, Jacob Desman, Gohta Aihara, Deborah I Weidman, Ashley Tsang, Katherine Kovrizhkin, Tatiana Pereira, Siddharth Arun, Tejus Pradeep, Shababa Matin, Robert P Liddell
Cancer Treatment and Research Communications, 2021
[Journal] [PDF]